Path.GetDirectoryName returned workingDir itself instead of its parent
whenever list.WorkingDir ended in a directory separator, placing
.claudedo-worktrees inside the target repo's own working tree. Add
WorktreeRootResolver to normalize the trailing separator before deriving
the sibling root and to guard that the resulting worktree path never
lands inside workingDir, used by both WorktreeManager and
PlanningSessionManager. Add a startup sweep (LegacyWorktreeFolderRecovery)
that warns when a list's working dir already contains a leftover
.claudedo-worktrees folder from before the fix.
EnsureExists blindly seeded ~/.todo-app/prompts/*.md with the bundled
default and never revisited it, so any file created by opening the
Files settings tab shadowed every later default change permanently
(SuggestImprovement/AskUser sections never reached real runs since
2026-06-04). PromptFiles now hashes what a file was seeded/saved with
in prompts/.defaults.json: Classify() tells missing/current-default/
known-past-default/edited apart, ReconcileStaleDefaults() drops files
that only ever matched a superseded default, and real edits are left
alone and surfaced in the Files tab with a diff + reset-to-default
action. QuarantineOrphans() moves stale-named leftovers (agent.md,
planning.md) into prompts/_orphans instead of silently deleting them.
Wired as a Worker startup sweep (PromptFileRecovery) alongside the
existing OrphanRecovery/AttachmentOrphanRecovery services.
AttachmentMcpTools exposes add_task_attachment (text or base64),
list_task_attachments, and remove_task_attachment on the external MCP
endpoint, so an agent can prepare reference files (plans, scripts) on a task
that will run later. Re-attaching the same name overwrites; add/remove refuse
on a running task.
TaskRunner appends attached files (absolute paths) to the run prompt as the
read-only Reference files section. Task and list deletes now remove the
on-disk attachment dir eagerly, and a startup AttachmentOrphanRecovery sweep
drops any attachments/<taskId>/ whose task no longer exists (covers list
cascade and planning-discard paths).
Worker now runs `claude --version` before listening; on non-zero exit
it logs critical and exits with code 1. Skippable via env var
CLAUDEDO_SKIP_CLI_PREFLIGHT=1 for environments without the CLI (tests,
dev). Closes verification step 2 / open.md item 3.1.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>